diff --git a/native/src/core/bootstages.rs b/native/src/core/bootstages.rs
index b60bdf381..9a0045277 100644
--- a/native/src/core/bootstages.rs
+++ b/native/src/core/bootstages.rs
@@ -16,7 +16,7 @@ use nix::fcntl::OFlag;
 use std::io::BufReader;
 use std::os::unix::net::UnixStream;
 use std::process::{Command, Stdio};
-use std::sync::atomic::Ordering;
+use std::sync::atomic::{AtomicBool, Ordering};
 
 bitflags! {
     #[derive(Default)]
@@ -185,7 +185,9 @@ impl MagiskD {
 
         setup_preinit_dir();
         self.ensure_manager();
-        self.zygisk.lock().unwrap().reset(true);
+        if self.zygisk_enabled.load(Ordering::Relaxed) {
+            self.zygisk.lock().unwrap().reset(true);
+        }
     }
 
     pub fn boot_stage_handler(&self, client: UnixStream, code: RequestCode) {
diff --git a/native/src/core/daemon.rs b/native/src/core/daemon.rs
index 43b16fb17..fc4b90233 100644
--- a/native/src/core/daemon.rs
+++ b/native/src/core/daemon.rs
@@ -33,7 +33,7 @@ use std::io::{BufReader, Write};
 use std::os::fd::{AsFd, AsRawFd, IntoRawFd, RawFd};
 use std::os::unix::net::{UCred, UnixListener, UnixStream};
 use std::process::{Command, exit};
-use std::sync::atomic::AtomicBool;
+use std::sync::atomic::{AtomicBool, Ordering};
 use std::sync::{Mutex, OnceLock};
 use std::time::Duration;
 
@@ -130,7 +130,9 @@ impl MagiskD {
                 info!("** zygote restarted");
                 self.prune_su_access();
                 scan_deny_apps();
-                self.zygisk.lock().unwrap().reset(false);
+                if self.zygisk_enabled.load(Ordering::Relaxed) {
+                    self.zygisk.lock().unwrap().reset(false);
+                }
             }
             RequestCode::SQLITE_CMD => {
                 self.db_exec_for_cli(client).ok();